Anjana
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PhD opportunity / AiCADD fellowship (MHRD, Govt. of India) of University of Kerala.
No. DCB/DBT-BIF/229 /14-15 07-11-2014 Applications are invited for the AiCADD fellowship (MHRD, Govt. of India) of University of Kerala. The terms and...SimLoRD: A read simulator for third generation sequencing reads
By Aaryan Lokwani 2756 days agobitbucket.org - SimLoRD is a read simulator for third generation sequencing reads and is currently focused on the Pacific Biosciences SMRT error model. Reads are simulated from both strands of a provided or randomly generated reference sequence. The reference...Rebaler: program for conducting reference-based assemblies using long reads.
By Jit 2730 days agogithub.com - Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences. I made Rebaler for bacterial genomes (specifically for the...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Neel 2660 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful...SAU Bioinformatics/Plant Biotech JRF Vacancy
Applications are invited for the post of Junior Research Fellow (JRF) to work on SERB, DST funded project entitled “Genome wide analysis of ascorbate oxidase multi-gene family and elucidating its role in negative regulation of stress response in...wtdbg2: A fuzzy Bruijn graph approach to long noisy reads assembly
By BioStar 2591 days agogithub.com - Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly...Walk in interview for Research Associate, Studentship and Traineeship at BIF, NEHU, Tura Campus
BIOINFORMATICS INFRASTRUCTURE FACILITY (BIF) Department of RDAP North-Eastern Hil University, Tura Campus Tura-79402, Meghalaya Walk in interview for Research Associate, Studentship and Traineeship at BIF Applications are invited for the...FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
By Jit 2233 days agobioinfo.ut.ee - FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the...Assistant Professor at GAUHATI UNIVERSITY, GUWAHATI
Advt. No.T/2014/4 Ref. No. GU/Estt/T/308(VI)/2014/6451-61 Applications are invited from the Indian citizens for five (5) teaching posts of Assistant Professor (Contractual) under various departments of Gauhati University. Details of the...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Jit 2220 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful in image classification. Unlike...
