Jit
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iSeqQC: a tool for expression-based quality control in RNA sequencing
By BioStar 2214 days agogithub.com - iSeqQC, an expression-based QC tool that detects outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC implements various statistical approaches including unsupervised clustering,...Ryan E. Mills Lab
Our research group is primarily focused on the analysis of whole genome sequence data to identify genetic variation (primarily structural variation) and examine their potential functional impact in disease phenotypes. We are particularly interested...SEASTAR: Systematic Evaluation of Alternative STArt site in RNA
By BioStar 2035 days agogithub.com - SEASTAR (Systematic Evaluation of Alternative STArt site in RNA) is a software package for Transcription Start Site (TSS) identification and quantification using only RNA-seq data. It assembles novel TSSs based only on RNA-Seq data and merges them...Rosenberg lab
Research. Research in the lab focuses on mathematical, statistical, and computational problems in evolutionary biology and human genetics. Long-term interests of the lab include topics such as: Human genetic variation Inference of human...Understanding RNA-Seq Normalization Methods: TPM vs. FPKM vs. CPM
By Neel 455 days agoChoosing the right normalization method depends on the specific objectives of your RNA-Seq analysis. TPM’s proportionality and robustness make it the preferred choice for most applications, while CPM serves well for differential expression...JRF Bioinformatics @ ICAR - National Research Centre for Orchids Pakyong
ICAR - National Research Centre for Orchids Pakyong F.No:NRCO/Admn/DBT /136 / Walk-in-Interviews will be held at 737106, Sikkim for the post of 01 (One Project ‘DBT’s Twinning programme for the NE’ titled “Assessment of some fragrant...
Frequent words problem solution by Perl
Last updated 3927 days ago by JitSolved with perl http://rosalind.info/problems/1a/ #Find the most frequent k-mers in a string.#Given: A DNA string Text and an integer k.#Return: All most frequent k-mers in Text (in any order).use strict;use warnings;my...-
Clump Finding Problem Solved with Perl
Last updated 3008 days ago by JitThe question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl RA at University of Delhi
Research Scientist Jobs opportunity in University of Delhi on temporary basis Qualifications : Ph. D. Desirable : Experience on DNA Markers, plant genome mapping and bioinformatics No. of Post : 03 Department : Genetics Salary : Rs....
