Jit
Enthusiast computational biologist with business dream !!!
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Short-read assembly using Spades !
Last updated 1075 days ago by Abhimanyu Singh Comments (2)If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the same Illumina data as we used above: illumina_R1.fastq.gz: the Illumina...Assistant Professor at Jawaharlal Nehru University in Delhi
Advt. No. RC/48/2014 SCHOOL OF COMPUTATIONAL AND INTEGRATIVE SCIENCES (SC&IS) ESSENTIAL QUALIFICATION : - M.Sc./M.Tech. in Physics/ Chemistry/ Biology/ Mathematics/ Statistics/ Bioinformatics/ Computational Biology. Ph.D. in the broad...Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
By Neel 1051 days agogithub.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...Memories Can Be Passed Down Through DNA
By Radha Agarkar 3898 days agoThe premise of Assassin's Creed is the reliving of other people's memories stored inside DNA. Well scientists have found that in mice, it actually happens! Anthony is joined by special guest and our friend Tara Long from Hard Science to explain how...Monkeypox virus isolate MPXV_USA_2022_MA001, complete genome
By Jit 899 days agowww.ncbi.nlm.nih.gov - LOCUS ON563414 197205 bp DNA linear VRL 30-MAY-2022 DEFINITION Monkeypox virus isolate MPXV_USA_2022_MA001, complete genome. ACCESSION ON563414 VERSION ON563414.3 KEYWORDS . SOURCE Monkeypox virus...Bioinformatics JRF/SRF position at NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY
NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY LBS, CENTRE, PUSA CAMPUS, IARI NEW DELHI NEW DELHI – 110 012 WALK- IN –INTERVIEWS Eligible candidates may appear in Walk-in-Interview on May 23, 2014 at 10 AM for the posts of Research...PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
By Abhi 493 days agogithub.com - Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies,...A History of Bioinformatics (in the Year 2039)
By Martin Jones 3824 days agoC. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039Is reference genome necessary for gene expression study in transcriptome sequencing or for variant...
Started by Rahul Agarwal 4195 days agoLike in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?Scientists map 17,294 proteins produced in human body
By Jit 3880 days ago17,294 proteins mapped in 30 organs of human body
