Poonam Mahapatra
Bioinformatics Researcher
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FiNGS: Filters for Next Generation Sequencing
By Neel 1367 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...
Libraries or management tools for high throughput sequencing data
Last updated 52 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...Visiting Scientist - Computational Genomics (two positions)
Scientific/Managerial & International Recruitment ICRISAT seeks applications from Indian nationals Visiting Scientist-Computational Genomics (2 positions), to be part of a team of Centre of Excellence in Genomics (CEG), (www.icrisat.org/ceg)...VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
By Rahul Nayak 2244 days agogithub.com - VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store...R programming and Jobs website
By Pragati Singh 3837 days agowww.programmingr.com - Welcome to the R Jobs section of ProgrammingR.com. If your organization has an R employment opportunity that you would like to have posted here, submit it via the contact page. Prospective employees: use the contact information provided in the...ngs-bits - Short-read sequencing tools
By Neel 1775 days agogithub.com - Binaries of ngs-bits are available via Bioconda. Alternatively, ngs-bits can be built from sources: Binaries for Linux/macOS From sources for Linux/macOS From sources for Windows-
Phylogenetic for Bioinformatics
Last updated 4150 days ago by Jitendra Narayan Comments (2)Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data suggests that all organisms on Earth are genetically related, and the genealogical... Stephen Friend: The hunt for "unexpected genetic heroes"
By Jitendra Narayan 3831 days agoWhat can we learn from people with the genetics to get sick — who don't? With most inherited diseases, only some family members will develop the disease, while others who carry the same genetic risks dodge it. Stephen Friend suggests we start...Perl and BioPerl Tutorials
By Jitendra Narayan 4107 days ago Comments (27)cbb.sjtu.edu.cn - This bookmark is created to store the useful Perl and BioPerl tutorial links at one place. Feel free to share and add more useful tutorial links here ....INSPIRE Faculty Scheme: a component of “Assured Opportunity for Research Career (AORC)” under...
Ministry of Science and Technology, Department of Science and Technology 7th ADVERTISEMENT – 2014 (2) INSPIRE Faculty Scheme: a component of “Assured Opportunity for Research Career (AORC)” under INSPIRE. The Department of Science and...
