BOL

github.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...

Temporary Project positions available purely on temporary basis - Oct/2013 1. Project Junior Research Fellow / Project Assistant Last Date: 11th Nov 2013 Qualification B.Tech (Comp. Sci.), B.Tech/M.Tech (Bioinformatics), MCA, M.Sc....

GATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...

We study the evolutionary biology of birds and relatives, combining field, museum and genomics approaches to understand the basis of avian diversity, evolution and behavior. Our guiding approaches include population genetics, which provides a...

FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...

Applications are invited for the following Positions in the AiCADD project funded by MHRD Govt of India Last Date for Submitting Application: 25th November 2013 1. Senior Scientist: (01 position) Pay Scale: Rs.40, 000/- Qualifications: PhD/...

gwct.github.io - Modern genome sequencing technologies provide a succint measure of quality at each position in every read, however all of this information is lost in the assembly process. Referee summarizes the quality information from the reads that map to a site...

VECTOR CONTROL RESEARCH CENTRE (Indian Council of Medical Research) Indira Nagar Medical Complex Puducherry-605006 WALK-IN-INTERVIEW The following vacancies shall be filled purely on adhoc basis under Non-Institutional adhoc project...

github.com - jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants...

Roslin Bioinformatics Group The Law group provides internal Institute-specific development, training and support roles for data manipulation, sequence analysis and any other aspect of the analysis of biological data using computer systems....