Jit
Enthusiast computational biologist with business dream !!!
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My commonly used commands in Bioinformatics
Last updated 2313 days ago by Rahul NayakFYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...Murray Cox's Genomicus Lab
This group interested in modeling genome dynamics in following topics: ---how genetic variation is distributed within and between individuals, ---determining how this diversity changes over evolutionary time. Hence, Cox group work at the...04- Informatics Approach to Cancer - Interview with Dr. Joel Saltz
By Shreya Ganguli 4066 days agoFor additional information visit http://www.cancerquest.org/joel-saltz-interview. Dr. Joel Saltz is a Professor in the Departments of Pathology, Biostatistics and Bioinformatics, and Mathematics and Computer Science at Emory University. Dr. Saltz's...Evolution and Cancer
By Shikha Logwani 4076 days agoAir date: Wednesday, January 04, 2012, 3:00:00 PM Time displayed is Eastern Time, Washington DC Local Category: Wednesday Afternoon Lectures Description: There is a broad consensus that cancer is the result of somatic cells having serially...Merqury: reference-free quality and phasing assessment for genome assemblies
By Jit 1632 days agogithub.com - Often, genome assembly projects have illumina whole genome sequencing reads available for the assembled individual. The k-mer spectrum of this read set can be used for independently evaluating assembly quality without the need of a high quality...Pre- or postdoctoral research fellowship in Structural Bioinformatics in Padova
University of Padova (URL: http://protein.bio.unipd.it/) A research fellowship is available at the BioComputing Laboratory, University of Padova (URL: http://protein.bio.unipd.it/). A highly motivated and creative candidate is sought to work on...Hawkeye: an interactive visual analytics tool for genome assemblies
By Abhimanyu Singh 2154 days agoamos.sourceforge.net - Genome sequencing remains an inexact science, and genome sequences can contain significant errors if they are not carefully examined. Hawkeye is our new visual analytics tool for genome assemblies, designed to aid in identifying and correcting...Contract Faculty-Bioinformatics at Maulana Azad National Institute of Technology
Contract Faculty-Bioinformatics at Maulana Azad National Institute of Technology Job Description:F.No.11/10(1)/929 Qualifications: Candidates should have Ph.D. degree. If Ph.D. candidates are not available at least Post Graduate degree with...CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS...
By BioJoker 2056 days agowww.nature.com - Validated a widely accessible approach that can be used to establish functional causality for noncoding sequence variants identified by GWASs. https://www.nature.com/articles/nm.3975Yau Group
Yau Group are a new research group based at the Wellcome Trust Centre for Human Genetics and the Department of Statistics at the University of Oxford. Yau Group develops statistical and computational methods for the analysis of genomic datasets...
