www.atgc-montpellier.fr - LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads. It uses a hybrid strategy, meaning that it uses two sets of reads: the reference read...
denbi-metagenomics-workshop.readthedocs.io - Welcome to the one-day metagenomics assembly workshop. This tutorial will guide you through the typical steps of metagenome assembly and binning.
The Tutorial Data Set
FastQC Quality Control
Assembly
Velvet Assembly
MEGAHIT...
github.com - DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer...
github.com - NextDenovo is a string graph-based de novo assembler for TGS long reads. It uses a "correct-then-assemble" strategy similar to canu, but requires significantly less computing resources and storages. After assembly, the per-base error rate...
23andMe’s mission is to help people access, understand, and benefit
from the human genome. We are a group of passionate individuals excited
to push the boundaries of what’s possible to help turn genetic insight
into better health and personal...
github.com - MEC, to identify and correct misassemblies in contigs. Firstly, MEC takes fragment coverage as the feature to detect the candidate misassemblies. Then, it can distinguish a large number of false positives from the candidate misassemblies based on...
National Agri-Food Biotechnology Institute
ADVT. No: 2017-Researcher (02)
JRF/SRF / Project Assistant-II recruitment in National Agri-Food Biotechnology Institute (NABI)
Essential Qualification: According to the DST (DST OM No.SR/S9/Z-09/2012...
github.com - SvABA is a method for detecting structural variants in sequencing data using genome-wide local assembly. Under the hood, SvABA uses a custom implementation of SGA (String Graph Assembler) by Jared Simpson, and BWA-MEM by Heng Li....
sourceforge.net - DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and...
JOB FUNCTIONBio Tech/R&D/Scientist
INDUSTRYBiotechnology/Pharmaceutical/Medicine
SPECIALIZATIONBasic Research,Bio-Statistician,Clinical Research
QUALIFICATION
Any Post Graduate
BA (Arts), B.Com. (Commerce), BE/ B.Tech (Engineering),...