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MGSE: Mapping-based Genome Size Estimation
By Shruti Paniwala 2244 days agogithub.com - MGSE can harness the power of files generated in genome sequencing projects to predict the genome size. Required are the FASTA file containing a high continuity assembly and a BAM file with all available reads mapped to this assembly. The script...Jarvis’ laboratory
Dr. Jarvis’ laboratory studies the neurobiology of vocal communication. We want to know how the brain generates, perceives, and learns behavior. We use vocal communication as a model behavior. Emphasis is placed on the molecular pathways involved in...SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs
By Neel 1906 days agogithub.com - The first and the only pre-alignment filtering algorithm that works efficiently and fast on modern CPU, FPGA, and GPU architectures. SneakySnake greatly (by more than two orders of magnitude) expedites sequence alignment calculation for both short...Professor and Associate Professors (PB-IV) Assistant Professors (PB-III) Job at IIIT, Allahabad
Indian Institute of Information Technology, Allahabad Devghat, Jhalwa, Allahabad – 211012, Uttar Pradesh, India E-mail: contact@iiita.ac.in, faculty.applications@iiita.ac.in Web: www.iiita.ac.in Phone : 0532-2922031/27/67 Applications are...OGDRAW - Draw Organelle Genome Maps
By Abhi 1617 days agochlorobox.mpimp-golm.mpg.de - OrganellarGenomeDRAW converts annotations in the GenBank or EMBL/ENA format into graphical maps. The input has to be a GenBank or EMBL/ENA flat file wherase the output can vary among several types of files....
Find certain files/documents in Linux OS
Last updated 4355 days ago by Rahul NayakAs bioinformatician I know the fact that we usually handle the large dataset and lost in the huge numbers of files and folders. In order to search the missing file a strong search command is required. The Linux Find Command is one of the most...Comparative Genomics Workshops !
By Rahul Nayak 1504 days agowww.genome.gov - This meeting's objective was to obtain a big picture look at the current state of the field of comparative genomics with a focus on commonalities across genomic investigations into humans, model organisms (both traditional and...Raghava's Group
Raghava's group is known for developing open source software or web servers. Group have developed large number of web-based services. Find more at http://www.imtech.res.in/raghava/Environmental Genomics Group SciLifeLab/KTH Stockholm
By BioStar 1195 days agohttps://github.com/envgen - Useful Metagenomics resources
