Rahul Nayak
A Bioinformatician
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simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
By Jit 2586 days agowww.ebi.ac.uk - simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations only incorporate noise due to sequencing and do not incorporate effects from...vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
By Jit 1795 days agogenome.sph.umich.edu - vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vtUni Computing Bergen Norway
Info on Uni Computing (Webpage: http://www.bccs.uni.no/) : Uni Computing (formerly Uni BCCS) is a department of Uni Research, affiliated with the University of Bergen. 5 groups in this lab works on computational resources, methods, algorithms,...What Junk DNA? It’s an Operating System
By Rahul Agarwal 4148 days agowww.genengnews.com - The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, space-filling material that happens to make up nearly 98% of the...Illumina reveals first dataset of long reads
By Rahul Agarwal 4144 days agoWith the help of Moleculo technology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is around 8,500 base pairs in release dataset. Best thing about this, there...Eivind Hovig's Lab
Bioinformatics relevant research topics are: genomic scale studies endogenous mechanisms of mutations, germ line and somatic computational aspects of immunology in cancer signalling networks three-dimensional organization of information in...Introduction of Epigenomics
By Rahul Agarwal 4100 days agowww.genome.gov - What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to...A-allele of SLC24A5 gene is found to be responsible for variation in skin color of South-East...
By Rahul Agarwal 4062 days agoMore is the A -allele, More is fairer the Skin !!Your stress/depression came from ancestor
By Rahul Agarwal 3889 days agoStress drives changes in the sperm microRNA which carry forward to later generationsGeneProf: analysis of high-throughput sequencing experiment
By Jit 2732 days agowww.geneprof.org - GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis for next-gen data! Some of...
