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Sequencing Solutions to World Health
By Rahul Agarwal 4105 days agowww.lifetechnologies.com - "New technology that quickly, easily and economically reveals the genomes of viruses and pathogens transforms public health and medicine." Source: Life technologiesComparison of Short Read De Novo Alignment Algorithms
By Rahul Agarwal 4113 days agobiochem218.stanford.edu - Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil GopalRNA Bioinformatics and High Throughput Analysis Jena
Research Topics: High Throughput Sequencing Analysis Comparative Genomics Identification and Annotation of Non-coding RNAs Bioinformatic Analysis and System Biology of Viruses Coevolution of Proteins and RNAs Algorithmic...Bio-Rad Acquires GnuBIO
By Rahul Agarwal 3872 days agoGnuBIO-Developer of Droplet-Based DNA Sequencing TechnologyDeadly Human Pathogen Cryptococcus Sequenced
By Rahul Agarwal 3866 days agoCryptococcus neoformans is a fungus responsible for a million cases of pneumonia and meningitis every year- are so malleable and dangerousDrawback of Exome Sequencing
By Rahul Agarwal 3828 days agoSmaller Exome datasets were found to be worse performer than those from larger datasets (WGS)
Pathway Analysis
Last updated 3699 days ago by Rahul Agarwal Comments (2)Pathway Analysis is usually performed with aim to enrich the genes with their functional information and reveal the underlying biological mechanisms pursue by genes. Pathway Analysis is not only limited to what biological pathways a particular set...CovCal: Coverage / Read Count Calculator
By Jit 3084 days ago Comments (1)apps.bioconnector.virginia.edu - Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and genome size, then select what you want to calculate. Written by Stephen...Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
By Jit 2552 days agoschatzlab.cshl.edu - Monitoring the progress of DNA molecules through a membrane pore has been postulated as a method for sequencing DNA for several decades. Recently, a nanopore-based sequencing instrument, the Oxford Nanopore MinION, has become available that we used...LRSDAY: Long-read Sequencing Data Analysis for Yeasts
By Poonam Mahapatra 1917 days agogithub.com - Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model organism with small genome size and great biotechnological importance, the budding...
