Rahul Agarwal
I'm a Bioinformatician and Programmer
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SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
By Rahul Nayak 1680 days agotelatin.github.io - A general-purpose program to manipulate and parse information from FASTA/FASTQ files, supporting gzipped input files. Includes functions to interleave and de-interleave FASTQ files, to rename sequences and...Assistant Professor - Medical Bioinformatics
Advt. No : ME-I/A-IV/03/14 No.of Posts:01 (SC) Pay Scale: Pay Band of Rs.15600-39100 + Rs.6000/- GP +NPA @ 25% of Basic Pay +Learning Resource Allowance @ Rs.20,000/-P.A.+ Conveyance Allowance @ Rs. 1650/-P.M.+ Academic Allowance @...Tbl2asn: a command-line program that automates the creation of sequence records for submission to...
By Poonam Mahapatra 3417 days agowww.ncbi.nlm.nih.gov - Tbl2asn is a command-line program that automates the creation of sequence records for submission to GenBank. It uses many of the same functions as Sequin but is driven generally by data files. Tbl2asn generates .sqn files for submission to GenBank....The 5 reasons to mistakes at bioinformatics work !!!
By Jit 4457 days agoWhen you're just starting out with biological programming, it's easy to run into complex problems that make you wonder how anyone has ever managed to write a program.PhD opportunity at Université de Liège - Belgium
PhD opportunity at Université de Liège - Belgium The Bioinformatics and Systems Biology Unit of Université de Liège (Belgium) is looking for a highly motivated master student with programming skills for a PhD thesis project (4 years, fully...NanoSim: nanopore sequence read simulator based on statistical characterization.
By Jit 3214 days agowww.bcgsc.ca - NanoSim, a fast and scalable read simulator that captures the technology-specific features of ONT data and allows for adjustments upon improvement of nanopore sequencing technology. The first step of NanoSim is read characterization, which provides...MEGADOCK 4.0
By Suleman Khan 4443 days agobioinformatics.oxfordjournals.org - An ultra–high-performance protein–protein docking software for heterogeneous supercomputers Summary: The application of protein–protein docking in large-scale interactome analysis is a major challenge in structural bioinformatics...SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
By Jit 2947 days agowww.bioinformatics.babraham.ac.uk - SeqMonk is a program to enable the visualisation and analysis of mapped sequence data. It was written for use with mapped next generation sequence data but can in theory be used for any dataset which can be expressed as a series of genomic...Genome sequence-based (sub-)species delineation.
By Abhimanyu Singh 2855 days agohttp://ggdc.dsmz.de/ - The GGDC web service reports digital DDH for a universal and accurate delineation of prokaryotic (sub-)species without inheriting the pitfalls of classic DDH, and also calculates differences in genomic G+C...
