Rahul Agarwal
I'm a Bioinformatician and Programmer
Our Sponsors
Related items
Statistics of current Sequencing and Bioinformatics market
By Rahul Agarwal 4093 days agowww.ogt.com - This survey conducted by Oxford Gene Technology, provider of innovative genetics research and biomarker solutions to advance molecular medicine, has released the results from a recent survey of researchers...Bioinformatics course and lectures
By Rahul Agarwal 4080 days agogtpb.igc.gulbenkian.pt - http://openwetware.org/wiki/User:Jarle_Pahr/BioinformaticsNew born babies get ready to know their whole genome soon!!!
By Rahul Agarwal 4078 days agoSequencing of hundreds of newbornsIntroduction of Epigenomics
By Rahul Agarwal 4048 days agowww.genome.gov - What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to...Your stress/depression came from ancestor
By Rahul Agarwal 3837 days agoStress drives changes in the sperm microRNA which carry forward to later generationsGeneProf: analysis of high-throughput sequencing experiment
By Jit 2679 days agowww.geneprof.org - GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis for next-gen data! Some of...INC-Seq: accurate single molecule reads using nanopore sequencing
By Jit 2534 days agogithub.com - INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling...Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 2365 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...npScarf: real-time scaffolder using SPAdes contigs and Nanopore sequencing reads
By Shruti Paniwala 2338 days agojapsa.readthedocs.io - npScarf (jsa.np.npscarf) is a program that connect contigs from a draft genomes to generate sequences that are closer to finish. These pipelines can run on a single laptop for microbial datasets. In real-time mode, it can be integrated with simple...NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data
By Jit 2282 days agogithub.com - NextSV, a meta SV caller and a computational pipeline to perform SV calling from low coverage long-read sequencing data. NextSV integrates three aligners and three SV callers and generates two integrated call sets (sensitive/stringent) for different...
