Points: 708
Shruti Paniwala
#HumanCellAtlas consortium present the #TabulaSapiens dataset. Provides a molecular definition of more than 400 cell types across 24 organs. Learn more: https:/
(701 days ago)
Brief description:
A Bioinformatician
Location:
Mumbai
Interests:
Skills:
About me
I am bioinformatics research fellow in a ICMR laboratory.
" Sequencing costs have plummeted with the help of new medical instruments: almost every 6 months we see new instrument with higher throughput like BGI’s DNBSEQ-T7 at 60 genomes per day. At the world’s rate of sequencing, we’ll generate 20 ExaBytes of data by 2025 – more than Twitter, Youtube and astronomy combined. In fact, it would take all the CPUs in every cloud and more than 200 days to run genome analysis. "
Question: What is the p-value?
Question: Unable to restart Apache !
Question: Why bioinformatics is important ?
- Shruti Paniwala published a blog post Understanding DUMP files from NCBI Taxonomy database !
- Shruti Paniwala posted a new ad in the ResearchLabs lsugenomics Lab
- Shruti Paniwala published a blog post SLURM Commands
- Shruti Paniwala bookmarked Human Complete Genome
- Shruti Paniwala published a blog post Finding a mimicry game for teaching on-line and mentioned general resources
- Shruti Paniwala published a blog post List of comparative genomics resources !
Biostatistics
Biostats materials ... Biostatistics is an innovative field that involves the design, analysis, and interpretation of data for studies in public health and medicine. Biostatistics experts arrive at conclusions about disease and health risks by evaluating and applying mathematical and statistical formulas to the factors that impact health.bioinfoirmatics study - research partner
For bioinformaticians to study , research toghether ( to share knowlwdge and cooperate )Molecular Modelling and Drug Design
Molecular Modelling
Python Everywhere
http://www.python.org/
PerlOneLiner for Bioinformatician
Last updated 2294 days ago by Shruti PaniwalaFILE SPACING------------ # Double space a fileperl -pe '$\="\n"'perl -pe 'BEGIN { $\="\n" }'perl -pe '$_ .= "\n"'perl -pe 's/$/\n/'perl -nE 'say' # Double space a file, except the blank linesperl -pe '$_ .= "\n" unless /^$/'perl -pe '$_ .= "\n" if...
- By Shruti Paniwala 701 days ago#HumanCellAtlas consortium present the #TabulaSapiens dataset. Provides a molecular definition of more than 400 cell types across 24 organs. Learn more: https:/
/ fcld.ly/ 9oala6q - By Shruti Paniwala 1097 days agoScientists has sequence 64 full #human #genomes, representing 25 different human populations from across the globe. https:/
/ science.sciencemag.org/ content/ 372/ 6537/ eabf7117 - By Shruti Paniwala 1156 days agoComputational Genomics with R http:/
/ compgenomr.github.io/ book/ #R #Computational #Genomics #Book #Tutorial
The new corona variant has 23 mutations in all, which is unusually huge !
By Shruti Paniwala 1221 days agoThe new SARS-CoV-2 version, B.1.1.7, which was first seen in the third week of September in Kent and Greater London, has since spread to other locations in the UK.Ramalingaswami Re-entry Fellowship
By Shruti Paniwala 1264 days agoRamalingaswami Re-entry #Fellowship 2020-2021 for Indian NationalsDBT BIOTECHNOLOGY ELIGIBILITY TEST (BET) 2020
By Shruti Paniwala 1345 days agoDBT-Junior Research Fellowship (DBT-JRF) in Biotechnology (2020)ENCODE3: A collection of research articles and related content describing the Encyclopedia of DNA...
By Shruti Paniwala 1358 days agoENCODE 3 A collection of research articles and related content describing the Encyclopedia of DNA Elements, its datasets and tools.
Understanding DUMP files from NCBI Taxonomy database !
By Shruti Paniwala 652 days agoTaxonomy database !Finding a mimicry game for teaching on-line and mentioned general resources
By Shruti Paniwala 669 days agofinding a mimicry game for teaching on-line and mentioned general resourcesOnline resources on must-read papers in evolutionary biology, for a literature club
By Shruti Paniwala 669 days agoonline resources on must-read papers in evolutionary biology, for a literature club
Human Complete Genome
By Shruti Paniwala 661 days agowww.science.org - Telomere-to-telomere consortium We have sequenced the CHM13hTERT human cell line with a number of technologies. Human genomic DNA was extracted from the cultured cell line. As the DNA is native, modified bases will be preserved. The data includes...JASMINE: Jointly Accurate Sv Merging with Intersample Network Edges
By Shruti Paniwala 665 days agogithub.com - This tool is used to merge structural variants (SVs) across samples. Each sample has a number of SV calls, consisting of position information (chromosome, start, end, length), type and strand information, and a number of other values. Jasmine...ChEMBL
By Shruti Paniwala 674 days agowww.ebi.ac.uk - ChEMBL is a manually curated database of bioactive molecules with drug-like properties. It brings together chemical, bioactivity and genomic data to aid the translation of genomic information into effective new drugs.Syri compares alignments between two chromosome-level assemblies and identifies synteny and...
By Shruti Paniwala 696 days agogithub.com - Syri compares alignments between two chromosome-level assemblies and identifies synteny and structural rearrangements.
