Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Finally we list publicly available tools and databases for pattern discov...Tags: Bioinformatics, Patterns, Tools, Book, Tutorial, Paper, Script, Algo
2734 days ago
Patterns: a modeling tool dedicated to biological network modeling
It is designed to work with patterned data. Famous examples of problems related to patterned data are: recovering signals in networks after a stimulation (cascade network reverse engineering), analysing periodic signals.Tags: Patterns, modeling, tool, biological, network, modeling
1788 days ago
GSP4PDB: a web tool to visualize, search and explore protein-ligand structural patterns
GSP4PDB is a user-friendly and efficient application to search and discover new patterns of protein-ligand interaction. GSP4PDB is part of the services provided by the Bioinformatic Group of the University of Talca http://gdblab.com/gsp4pdb/gsp4pdb2/ https://bmcbioinformati...Tags: GSP4PDB, web, tool, visualize, search, explore, protein-ligand, structural, patterns
1555 days ago