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Results for "backward-chaining"

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• • Jit@jit.aber

  

  Kaiju

  Kaiju is a program for the taxonomic classification of metagenomic high-throughput sequencing reads. Each read is directly assigned to a taxon within the NCBI taxonomy by co...

  2919 days ago

• • Jit@jit.aber

  

  Many-Core Engine (MCE) for Perl example

  MCE spawns a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows a bank queuing model. Imagine the line being the data a...

  2701 days ago

• • Jit@jit.aber

  

  scikit-bio™ is an open-source, BSD-licensed, python package providing data structures, algorithms, and educational resources for bioinformatics.

  scikit-bio is currently in beta. We are very actively developing it, and backward-incompatible interface changes can and will arise. To avoid these types of changes bei...

  2306 days ago

• • Jit@jit.aber

  

  minialign: fast and accurate alignment tool for PacBio and Nanopore long reads

  Minialign is a little bit fast and moderately accurate nucleotide sequence alignment tool designed for PacBio and Nanopore long reads. It is built on three key algorithms, minimizer-based index of the minimap overlapper, array-based seed chaining, and SIMD-parallel Smith-Waterman-Gotoh extension.

  2223 days ago

• • Jit@jit.aber

  

  BETSY: A new backward-chaining expert system for automated development of pipelines in Bioinformatics

  The BETSY provides a command-line interface and available at https://github.com/jefftc/changlab. A user first searches in the knowledge base for desired output and then...

  2015 days ago