GARM:Genome Assembly, Reconciliation and Merging
...erent assemblers using the same or different sequencing technologies. When scaffolds are provided, a process of finding probable compressions or extensions (CE) problems in the assembli...2738 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...elies on an efficient and conservative traversal of the subgraph of the k-mer (deBruijn) graph of oligonucleotides with unique high quality extensions in the dataset, avoiding an e...2415 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
...reference genomes. In addition, the modular framework of DFAST allows users to customize the annotation workflow easily and will also facilitate extensions for new functions and incorpo...2408 days ago
Building Web UIs With Mojolicious Perl
...ver and many other features one needs to build a web application. It's easy to install, has an applciation generator script and many plugins and extensions. Libraries for developing We...2366 days ago
2366 days ago
mojolicious: a next generation web framework for the Perl programming language.
...modules to be installed) Fresh code based upon years of experience developing Catalyst, free and open source. Hundreds of 3rd party extensions and high quality spin-of...2349 days ago
NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...read and then a banded Smith-Waterman alignment algorithm to compute the final alignment. Ngmlr uses a convex gap cost model that penalizes gap extensions for longer gaps less than for...2246 days ago
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