FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
...that are unique in human genome, counts the frequency of k-mers in sequencing data and predicts the genotype. All this takes less than 1 hour on average low-cost Linux server. http:...1588 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...otide scan check)). Statistics are also reported (overall nucleotides, average G+C content, nucleotide scan...f not GT starting / AG ending introns, minimum / maximum / average length, length standard devia...1451 days ago
698 days ago
auN: a new metric to measure assembly contiguity
Given a de novo assembly, we often measure the “average” contig length by N50. N50 is neither the real average nor median. It is the length...671 days ago