2663 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
.... Current cross-cohort RNA- and small-RNA-Seq studies span tens of replicates and b...ross several different institutions. For such studies, Strand NGS v3.1 includes con...UMI support can be used in single-cell-based studies that reveal tumor-cell hetero...2414 days ago
AVID: A Global Alignment Program
...established a format for the representation of alignments and methods for their comparison. These formats and methods should be useful for future studies. The tools we have developed...2566 days ago
Synteny Portal: a web-based application portal for synteny block analysis
...interface. We believe that Synteny Portal will serve as a highly valuable tool that will enable biologists to easily perform comparative genomics studies by compensating limitations o...2566 days ago
BEDOPS v2.4.26: high-performance genomic feature operations
BEDOPS v2.4.26 is a suite of tools to address common questions raised in genomic studies — mostly with regard to overlap and proximity relationships between data sets. It aims t...2547 days ago
2491 days ago
TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
...ips of 800 human TFs and 828 mouse TFs, respectively. They have been derived from 11,237 pubmed articles, which describe small-scale experimental studies of transcriptional regulation...2355 days ago
HTTDB - Horizontally transferred transposable elements database
...bout HTT patterns, such as where in the tree of life these cases are more frequently found. This is mainly due to the historical bias and lack of studies in many taxa. To date, there...2322 days ago
2236 days ago
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and read length. Several studies require long and accurate reads includ...2113 days ago