Building Web UIs With Mojolicious Perl
...ator script and many plugins and extensions. Libraries for developing Web applications Amon2 Catalyst - Overflowing with features. Very popular. Dancer (Official site)...2349 days ago
JPred4: A Protein Secondary Structure Prediction Server
JPred4 (http://www.compbio.dundee.ac.uk/jpred4) is the latest version of the popular JPred protein secondary structure prediction server which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure prediction.2346 days ago
UCSC SARS-CoV-2 Genome Browser
The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation...878 days ago
GenomeThreader: Gene Prediction Software
...are used to predict gene structures via spliced alignments. GenomeThreader was motivated by disabling limitations in GeneSeqer, a popular gene prediction program which...2068 days ago
vcfR: a package to manipulate and visualize VCF data in R
...Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file or converted into other popular R objects (e.g., genlight, DN...2047 days ago
2031 days ago
Biotite: A general framework for computational biology
...ther databases such as RCSB PDB, and application provides interface for external software. The Biotite package bundles popular tasks in computational biolog...1993 days ago
MSAProbs - Parallel and accurate multiple sequence alignment
...MSAProbs is based on a combination of pair hidden Markov models and partition functions to calculate posterior probabilities. Assessed using the popular benchmarks: BAliBASE, PREFAB,...1789 days ago
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model organism with sma...1741 days ago
heatmaply: popular graphical method for visualizing high-dimensional data
This work is based on ggplot2 and plotly.js engine. It produces similar heatmaps as d3heatmap, with the advantage of speed (plotly.js is able to handle larger size matr...1604 days ago