Results for "Genome Project"
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...arily web-based front-end to comparative genome datasets warehoused in a chad...r Institute (JCVI) and the Institute for Genome Sciences (IGS) at the Univers...ege Park to support a number of research projects that involve comparative genome analysis. The following sectio...2830 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "ba...an attempt to produce a realistic assessment of genome assembly software in a rapidl...of GAGE have now been published in the journal Genome...2830 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications.... Users can interact with the genome using a powerful pan-and-zoom...e-write of CGView, a circular genome viewer written by Paul Stotha...2818 days ago
BLAST Ring Image Generator (BRIG)
...ar comparisons between a large number of genomes, with a focus on handling genome assembly data. The applicatio...is available at: http://sourceforge.net/projects/brig If you have any quest...read coverage can be displayed for draft genomes; customized graphs and annota...2807 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome...
2807 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for ne...ple haploid or diploid pairs of incompatible loci can be spread throughout the genome...2806 days ago
- The accurate description and annotation of structural variants can be complex. This is due to the different r...r positions. Furthermore, multiple rearrangements in a single area of the genome...
2806 days ago
- ...tions (CNAs) of chromosomal segments in tumor genomes. However, there is lack of c...ion of chromosomal CNA-associated breaks by a genome-wide approach, which can be a...‘GeneBreak’, is implemented in R (www.cran.r-project.org) and is available from Bi...
2187 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of...lexa-reads, map them flexibly to several reference genomes using one of four different...ut is furthermore compatible with software such as genome...
2803 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacte...main challenges in analyzing a metagenome is phylogenetic classificatio...ation is a useful prerequisite for genome assembly and for analysi...inaccurate, requiring metagenomics projects to use older, long-read tech...
2797 days ago
