Results for "Genome Size"

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  • VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening

     related tasks on Linux-based computer clusters of any type and size which are managed by a batchsystem ...

    1465 days ago

  • PHYMMBL

    Metagenomics sequencing projects collect samples of DNA from uncharacterized environment...cies. One of the main challenges in analyzing a metagenome is phylogenetic classificatio...s. Such classification is a useful prerequisite for geno...

    2807 days ago

  • Ribbon !!

    Visualization has played an extremely important role in the current genom...information in read-to-reference or genome-genome alignments is lost for struct...sed this problem by creating Ribbon (genomeribbon.com) an interactive onl...lso load coordinate files from whole geno...

    2796 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other various next-genera...of extremely large datasets that cannot typically be computed in-memory due to size restrictions. Conclusions: sh...

    2796 days ago

  • GenomeScope: open-source web tool to rapidly estimate the overall characteristics of a genome, including genome size, heterozygosity rate, and repeat content from unprocessed short reads

    Summary: GenomeScope is an open-source web too...e overall characteristics of a genome, including genome size, heterozygosity rate, and repea...res are essential for studying genome evolution, and help to choose...datasets with a wide range in genome sizes, heterozygosity levels, and...

    2389 days ago

  • Beagle

    Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, an...2007) Rapid and accurate haplotype phasing and missing data inference for whole geno...

    2790 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for c...ision medicine. We build self-improving systems to analyze millions of genomes, including the Graph Geno...

    2789 days ago

  • eFORGE.v1.2

    The eFORGE tool provides a method to view the tissue specific regulatory component of a set of EWAS DMPs. eFORGE analysis takes a set of DMPs, such as those hits above geno...

    2789 days ago

  • ART: Set of Simulation Tools

    ART is a set of simulation tools to generate synthetic next-generation sequencing reads....a primary tool for the simulation study of the 1000 Genomes Project . ART is implemented...UCSC BED file format. ART can be used together with geno...

    2783 days ago

  • LINKS

    LINKS is a genomics application for scaffolding genome assemblies with long reads, such as those produc...d. It can be used to scaffold high-quality draft genome assemblies with any long sequ...nces (eg. ONT reads, PacBio reads, another draft geno...

    2782 days ago