1695 days ago
phyloXML: XML for evolutionary biology and comparative genomics
phyloXML (example) is an XML language designed to describe phylogenetic trees (or networks) and ass...a Definition (XSD) language. http://www.phyloxml.org/archaeopteryx-js/adh.html1662 days ago
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplementary information on benchma...cumentation site http://biodatageeks.org/sequila/benchmarking/benchmarking.html...1655 days ago
StringTie Transcript assembly and quantification for RNA-Seq
StringTie is a fast and highly efficient assembler of RNA-Seq alignments into p...ftware like Ballgown, Cuffdiff or other programs (DESeq2, edgeR, etc.).1478 days ago
1625 days ago
1618 days ago
modelStudio: a package automates the explanation of machine learning predictive models
The modelStudio package automates the explanation of machine learning predictive models. This package ge...dvanced interactive and animated model explanations in the form of a serverless HTML...1616 days ago
1614 days ago
Understanding your reads and mapping !
One of the best tutorial for beginners ... https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2017/Day1/Session4-seqIntro.html1610 days ago
1605 days ago