Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying curiosity , bu...3023 days ago
2970 days ago
3010 days ago
RNA-Seq De novo Assembly Using Trinity
...nity, developed at the Broad Institute and the Hebrew University of...odules: Inchworm, Chrysalis, and Butterfly, applied sequentially to...ull-length splicing isoforms and to tease apart transcripts derived...ced transcripts. Chrysalis clusters the Inchworm contigs into c...3007 days ago
2970 days ago
Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline3000 days ago
PhyloGrapher - Graph Visualization Tool
...tudy evolutionary relationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool that generates custom graphs for a given se...2993 days ago
2993 days ago
RACA: Reference-Assisted Chromosome Assembly
Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into l...2993 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...an ultrafast, memory-efficient and highly accurate pair-end read merger. It is f...ized and can run with as low as just a few kilobytes of memory. PEAR evaluates a...input. In addition, it implements a statistical test for minimizing false-positi...2993 days ago