Results for "PA"
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Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.2960 days ago
Stand-alone programs for Bioinformatician
...t specifically for a Linux 64-bit machine. For help on the bigBed and bigWig applications see:http://genome.ucsc.edu/goldenPath/help/bigBed.htmlhttp://genome.ucsc.edu/goldenPath/help/bigWig.html View the...2960 days ago
- ...ng on submit then returns a table of your inputs matched against all the outputs selected in the exact order as entered. Results can be limited to a particular taxon by entering it'...
2949 days ago
- This histone database can be used to explore the diversity of histone proteins and their sequence variants in many organisms. The resource was established to better u...
2948 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with...hyl-seq. In addition, methylKit can deal with base-pair resolution data for 5hmC ob...
2948 days ago
- ...tents of genome assembly data sets as a QC step. This repository accompanies the paper:Blobology: exploring raw g...contains bash/perl/R scripts for running the analysis presented in the paper to create a preliminary as...
2938 days ago
- The Genome Assembly Evaluation Metrics and Reporting (GAEMR) package is an assembly analysis framework composed a number of integrated modules. These module...
2937 days ago
- ...age, and taxonomic annotation for collections of contigs with a view to separating out those belonging to...g (see below for a description). The easiest way to use Blobsplorer is as part of a workflow using scripts...
2937 days ago
- LoRMA is a tool for correcting sequencing errors in long reads such those produced by Pacific Biosciences sequencing machines. Publication: L. Salmela, R. Walve, E. Rivals, and...
2221 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configu...2221 days ago
