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...uencing data without having to learn extensive bioinformatics skills. It covers all steps from tissue collection, sample preparation and computer setup, through addressing biologica...2646 days ago
TMAP - torrent mapping alignment program General Notes
...alignment software for short and long nucleotide sequences produced by next-generation sequencing technologies. The latest TMAP is unsupported. To use a supported version, please see the...2646 days ago
- ...s, this is realized as an array, vector, list, or sequence. These are universal data structures. Virtually all modern programming languages support them in one form or anoth...
2644 days ago
WGS Celera Assembler version 8.3rc2
...urbe 540K Apr 10 11:41 ctgcns-rwxrwxr-x 1 urbe urbe 162K Apr 10 11:40 deduplicate-rwxrwxr-x 1 urbe urbe&n...Apr 10 11:41 runCA-rwxrwxr-x 1 urbe urbe 88K Apr 10 11:41 runCA-dedupe-rwxrwxr-x 1 urbe urbe ...2638 days ago
- ...in NCBI taxonomy as of October 18th, 2016: 1,135,169 species including 10,545 Archaea, 418,777 Bacteria and 705,847 Eukaryotes. The Lifemap tree is updated every two weeks. &nbs...
2638 days ago
- UpSetR generates static UpSet plots. The UpSet technique visualizes set intersections in...layout and introduces aggregates based on groupings and queries. The matrix l...a correctly formatted.csv file. "List" takes up to 6 different lists that con...
2634 days ago
DeCoSTAR - Detection of Co-evolution
...re deduced from reconciled gene trees in a context of birth, speciation, duplication, loss, transfer, whic...ious software DeCo, DeCoLT, ArtDeCo and DeClone. It provides statistical supports on ancestral adjacencies...2634 days ago
- ...rotein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000. More at fil...
2621 days ago
Enrichr: a comprehensive gene set enrichment analysis
...-wide experiments. Here we present a significant update to one of the tools in th...ichr including the ability to submit fuzzy sets, upload BED files, improved appli...//amp.pharm.mssm.edu/Enrichr. https://academic.oup.com/nar/article-lookup/doi/10...2621 days ago
- FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Bot...
2615 days ago
