Results for "Various bioinformatics software"
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CLgenomics is a standalone desktop software specifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid and responsive expl...2671 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and s...2669 days ago
- MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maxim...ing summary page.Users can use MEGAN or similar software on MaxBin...process is finished. https://academic.oup.com/bioinformatics/article/32/4/605/174446...
2669 days ago
CONCOCT: Clustering cONtigs with COverage and ComposiTion
A program for unsupervised binning of metagenomic contigs by usi...inkage data from paired end reads. Warning! This software is to be considered under dev...m one version to another. If you want to use this software, please stay up to date with...2669 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in a...date license information. A separate page lists commercial software. Know of any other open source software for PacBio data? Email u...2659 days ago
- Krona allows hierarchical data to be explored with zooming, multi-layered pie charts. Krona charts can be created using an Excel template or KronaTools, which includes support for several bioinfor...
2653 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annot...2648 days ago
- SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) sin...files, and we take care of the rest! For the earlier version, see Hughes Lab Bioinfor...
2644 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing with non-model organisms acquir...scriptomic high-throughput sequencing data without having to learn extensive bioinfor...
2641 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However,...l species using HTS. The course consists of a practical training module, HTS bioinfor...
2639 days ago
