splitbam: splits a BAM by chromosomes
splitbam splits a BAM by chromosomes. Using the reference sequence dictionary (*.dict), it also creates some empty BAM files if no sam record was found for a chromosome. A pair of...2675 days ago
YASRA: Reference based assembler
YASRA (Yet Another Short Read Assembler) performs comparative assembly of s...substantially from the genome being sequenced. Mapping reads to reference...of LASTZ (Harris et al), a pairwise sequence aligner compatible with BLAST...for newer version) for aligning the sequence...2674 days ago
2674 days ago
2672 days ago
2669 days ago
2668 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script lin...2668 days ago
2660 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible...o® data, in addition to PacBio's own SMRT® Analysis suite. All packages are belie...ased alignment Consensus and variant calling RNA analysis Epigenetic base modification...2660 days ago
2644 days ago