Results for "CA"
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...airs sequencing libraries and returns scaffolded homozygous genome asse...put contigs. In addition, Redundans will automatically close the gaps r...igs from an initial de novo assembly scaffolding: joining of genome fr...2854 days ago
- ...onding multiple sequence alignments and co-variation information.R4RNA is the R package powering R-chie, available for download and local use for more customized figu...
2854 days ago
- ...row names must begin with a letter (e.g. 'A', 'A0', 'A-0') and can only contain letters, number...help? Post questions to the Circos Google Group. http://mkweb.bcgsc.ca/tableviewer/visualize/
2853 days ago
- ...rnment agencies. The tasks of sequencing and assembly were handled by dedicated sequencing facilities, of which only a few existed around the globe. Naturally, the capacities at those sequencing f...
2850 days ago
- ...land: Baltimore. Sybil has been used at TIGR/JCVI, IGS, NYU, New York Medical College, Novartis Vaccines a...ive genome analysis. The following sections provide some high-level technical details about the overall ar...
2848 days ago
- ACT is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and anal...he entire sequences and their annotation. It can read complete EMBL, GEN...
2848 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "b...have now been published in the journal Genome Research: GAGE: A critical evaluation of genome assembl...2848 days ago
OPERA : Optimal Paired-End Read Assembler
...nd orient the intermediate contigs/scaffolds assembled in a genome a...bly project, in a process known as Scaffolding. OPERA is based on an...Note that since the original publication, we have made significant...cted N50 and reduced the number of scaffolding errors. Furthermore,...2846 days ago
- ...ed genome. In addition to the role of a typical assembler, fermi also aims t...10 and 2012) and has a similar workflow.As a typical de novo assembler, fermi ten...invoking make. Premature assembly processes can be resumed. Here is an examp...
2846 days ago
CGView - Circular Genome Viewer
...quality genome maps for use in publications and websites, or as a vi...sequence annotation pipeline. Users can interact with the genome usi...xamples of some of the images GView can produce, see the Image Galle...fonts for the various map elements can be adjusted in real time. Cu...2836 days ago
