PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool ...ills or reduces as many captured gaps as possible to produce upgraded draft genomes. ----- PBHoney -----Rea...2675 days ago
YASRA: Reference based assembler
...assembly of short reads using a reference genome, which can differ substantially from the genome being sequenced. Mapping r...and http://www.bx.psu.edu/~rsharris/lastz/newer for newer version) for aligning the sequences to the reference genome. Please install LASTZ (the ne...2673 days ago
2673 days ago
2671 days ago
2671 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 1...2669 days ago
2669 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consis...ding databases. SeqMule can be used for both Mendelian disease study and cancer genome study.2667 days ago
2661 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, i...alling RNA analysis Epigenetic base modifications and methylation Barcoding Genome Browsers Run QC Frameworks...2659 days ago