Results for "Sequence analysis."
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JSON (JavaScript Object Notation) is a lightweight data-interchange format. It is easy for humans to read and w...alues. In most languages, this is realized as an array, vector, list, or sequence....2640 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non-model organisms, for which little previous sequence...
2639 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation seque...types. After correction, a larger portion of the sequence of PacBio reads is usable for detection of region of similarity with other sequences...2634 days ago
Metagenomics assembly workshop !!
Welcome to the one-day metagenomics assembly workshop. This tutorial will guide you through the typical steps...ng MaxBin Binning MetaBAT Binning Classification Kraken Taxonomic Sequence...2626 days ago
- DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the...rotein-protein search as well as DNA-protein search on short reads and longer sequences...
2617 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this do...2617 days ago
- NGS data are just a bunch of sequences, you have no idea which region in the genome each sequences comes from, which gene it represents...To know that you have to align the sequences to the reference sequence. T...ces is used.In either way, aligning your sequence...
2612 days ago
- FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence...Trust Sanger Institute to bundle a FASTA sequence...
2611 days ago
- A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial g...
2610 days ago
CLA: Contig-Layout-Authenticator
To improve upon the shortcomings associated with the construction of draft genomes with Illumina paired-end sequenci...ther widely-used scaffolding and ordering tools using both simulated and real sequence...2609 days ago
