ERGO 2.0 Bioinformatics suites
...with the largest collection of microbial metabolic and non-metabolic pathways, ERGO™ assigns functions to genes, integrates genes into pathways, and identifies previously...2605 days ago
ANGES: reconstructing ANcestral GEnomeS maps
This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01&...2603 days ago
Pollux: platform independent error correction of single and mixed genomes
...times more rare than successfully corrected errors. Furthermore, we show that the quality of assemblies improves when reads are corrected by our software. https://bmcbioinformatics...2602 days ago
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology
SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial genomes. SIMBA was created to assist bioinformaticians to assemble bac...2598 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known r...2597 days ago
dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
...sequenced genomes; dbCAN provides the most complete set of metagenomic CAZyme genes published so far and represents the first step towards discovering novel CAZyme c...2592 days ago
Genome Annotation Transfer Utility (GATU)
Genome Annotation Transfer Utility (GATU) was designed to facilitate quick, effic...further analyzed using BLAST, VGO and BBB. Afterwards, they can either be accept...on genes as well as mature peptides. Although it was designed for use with viral...2592 days ago
2587 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...ction, for which a highly sensitive overlapper is required.Currently, development of a new spliced-alignment mode for mapping RNA-seq reads is under way.Description of the current e...2583 days ago
Genetic-mapper: SVG Genetic Map Drawer
...e map in Scalable Vector Graphics (SVG) format. The resulting file can either be submitted for publication and edited with any vectorial drawing software like Inkscape and...2572 days ago