ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that es...port findings regarding errors in sequencing. The method can be used for whole genome shotgun (WGS) sequencing data...2686 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool ...ills or reduces as many captured gaps as possible to produce upgraded draft genomes. ----- PBHoney -----Rea...2683 days ago
YASRA: Reference based assembler
YASRA (Yet Another Short Read Assembler) performs...e assembly of short reads using a reference genome, which can differ substantially from the genome being sequenced. Mapping read...for aligning the sequences to the reference genome. Please install LASTZ (the ne...2681 days ago
2681 days ago
2679 days ago
2679 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than...2676 days ago
2676 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consist...ing databases. SeqMule can be used for both Mendelian disease study and cancer genome study.2675 days ago
2668 days ago