2598 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-genera...ffolds, but makes fewer errors. This result is further improved when additional data, in the form of related genom...2596 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of...2595 days ago
dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
dbCAN is a web server and DataBase for automated Carbo...rces on the web include CAZy database and CAT. All da...ily classification from CAZy database while it has the fol...ies; dbCAN make all pre-computed data freely available to the publi...2590 days ago
2590 days ago
NovelSeq: Novel Sequence Insertion Detection
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/203857262579 days ago
BEDOPS v2.4.26: high-performance genomic feature operations
BEDOPS v2.4.26 is a suite of tools to address common que...egard to overlap and proximity relationships between data sets. It aims to be scalable...urate analysis and management of large-scale genomic data. The overview section of the...2575 days ago
2562 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphica...ext-gen analysis for next-gen data! Some of GeneProf's highligh...b-based interface:Access your data at any time from any computer...le modules:Advanced users and data analysis experts benefit from...al 'Examining Public Next-Gen Data..'). Extensibility:Algorithm...2552 days ago
2558 days ago