Results for "PE"
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Entrez Direct: E-utilities on the UNIX Command Line
...dow. Functions take search terms from command-line arguments. Individual operations are combined to build...move seamlessly between EDirect commands and UNIX utilities or scripts to perform actions that cannot be a...2811 days ago
- ...ant role in the current genomic revolution to inspect and understand variants, ex...multiple chromosomes, while allowing detailed inspection of individual reads (Sup...on can be used to test assembly algorithms or inspect the similarity between spec...
2809 days ago
- ...sources as well as programming acumen. Since heatmaps are used to depict high-dimensional numerical data as a colored grid of cells, efficiency and speed have often proven to be cri...
2809 days ago
- Summary: GenomeScope is an open-source web tool to rapidly estimate the overa...luding genome size, heterozygosity rate, and repeat content from unprocessed sh...nd Implementation: http://qb.cshl.edu/genomescope/, https://github.com/schatzla...
2401 days ago
- ...le is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-des...4.1 has a more accurate genotype phasing algorithm and a very...07) Rapid and accurate haplotype phasing and missing data infe...
2803 days ago
- ...gram for phasing observed genotypes and imputing missing genotypes. Most people use just a coup...also built up a collection of specialized and powerful options....en follow the instructions for opening the download package. On...like to know if the program can perform a function that isn't li...
2803 days ago
- ...ive update to Shaun Purcell's PLINK command-line program, developed by Christopher Chang&nb...Sinai School of Medicine, and others. (What's new?) (Credits.) (Methods paper.)
2803 days ago
- ...FORGE tool provides a method to view the tissue specific regulatory component of...hed background DMPs. It assesses enrichment on a per cell type basis, since funct...ts are differentially active in different cell types, and hence can expose tissue...
2802 days ago
Statistical for biological research
...is in biological research, but too often it is considered only after an experiment is completed, when it m...of Significance column on statistics explains many key statistical and experimental design concepts. Othe...2796 days ago
- HybPiper was designed for targeted sequenc...ed for gene regions of interest, especially for phylogenetics. HybPiper is a suite of Python scripts...usly based on bait sequences. HybPiper pipeline starts with high-th...translated protein sequence. HybPiper also includes post-processin...
2795 days ago
