Results for "vi"
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...aftools - An R package to summarize, analyze and visualize MAF files. Introductio...age attempts to summarize, analyze, annotate and visualize MAF files in an effici...and H.P. Koeffler, Maftools: Efficient analysis, visualization and summarization...2690 days ago
- The hive plot is a rational visualization method for drawing networks....the hive plot is to establish a new baseline for visualization of large networks...al and tunable and useful as a starting point in visually exploring network struc...
2690 days ago
- ABACAS is intended to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence. It uses M...
2690 days ago
- ...etween a central reference sequence and other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. Contig bounda...
2690 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results...between species or strains.It can be easily used to compare, parsing and visualize large genomic sequence...
2689 days ago
- ...an additionally import their own custom sequence and annotation data. Individual annotation objects are di...The results of these comparative analyses are also displayed in the 3D environment of Sockeye. By using t...
2689 days ago
- ...rcos plot tool (J-Circos) that is an interactive visualization tool that can plot...le to dynamically add data to the figure, and providing information for specific...sion transcripts that are otherwise difficult to visualize from next-generation s...
2689 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...ed. This software distribution includes both the DAGchainer utility and a Java-based graphical interface that allows the inputs and outputs to be navigated and interrogated dynamic...2688 days ago
- ...ment, and shuffle genomic intervals from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individual tool is designed to do a...
2682 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...o show applicability of the method for variant calling and allele dosage estimation. Results for simulated and real datasets are discussed and provide evidence that ConPADE performs we...2682 days ago
