Results for "Genome Sequence"
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...bl database project to import sequence and annotation information fr...nally import their own custom sequence and annotation data. Individu...Ensembl-derived and imported sequences can be analyzed by using a s...le to compactly display cross-sequence comparisons. This provides th...2690 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...f syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates. Using a scoring fu...arge evolutionary conserved regions of genomes between two organisms. Alterna...2690 days ago
- Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome arithmetic: that is, set theory on the genome....
2684 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that estimates the ploidy of any given...port findings regarding errors in sequencing. The method can be used for whole genome s...2684 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLANDO,...a leader in technology innovations for healthcare using genomics. By enhancing sequence-based diagnostics and clinica...2443 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained...y fills or reduces as many captured gaps as possible to produce upgraded draft genomes....2680 days ago
splitbam: splits a BAM by chromosomes
splitbam splits a BAM by chromosomes. Using the reference sequence dictionary (*.dict), it also creates some empty BAM files if no sam record was found for a chromosome. A pair of 'mock' SAM-Reco...2679 days ago
YASRA: Reference based assembler
...short reads using a reference genome, which can differ substantially from the genome being sequenced. Mapping reads to referenc...STZ (Harris et al), a pairwise sequence aligner compatible with BLAST...ewer version) for aligning the sequences to the reference genome. Please install LASTZ (the newe...2678 days ago
- ...ifying single-base substitutions between two closely related genomes without the help of a reference genome. DIAL works even when the dep...he genetic diversity of endangered species as the identified sequence differences can be used to de...
2678 days ago
- ...ecifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid...s. To use CLgenomics, individual genome data (genome sequences + annotation details) are...available Bacterial and Archaeal genomes....
2676 days ago
