SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alig...uma. Bioinformatics, 26(9), 1145-51. Tutorial at http://evomics.org/learning/genomics/satsuma/2964 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configurat...2216 days ago
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Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and str...2784 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorit...function for novel motifs. Our results demonstrate the power of comparative genomics to further our understanding...2784 days ago
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