2691 days ago
2630 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present...ing the ability to submit fuzzy sets, upload BED files, improved application programmi...2607 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-generation se...nformation sources. GRASS offers a mixed-integer programming formulation of the contig sca...procedure and an unconstrained binary quadratic programmi...2581 days ago
2548 days ago
2529 days ago
MOSS: A System for Detecting Software Similarity
...ate, the main application of Moss has been in detecting plagiarism in programming classes. Since its developmen...own to us). Moss can currently analyze code written in the following languages: C, C++, Java, C#, Python, V...2381 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the course empowered to conduct inde...tes, although the course will require familiarity with UNIX scripting and/or programmi...2391 days ago
FOGSAA: Fast Optimal Global Sequence Alignment Algorithm
Sequence alignment algorithms are widely used to infer similarirty and the point of differences between pair of sequen...eotide) and results in an optimal alignment faster than conventional dymanic programmi...2382 days ago
LRCstats: Long Read Correction Statistics
LRCstats is an open-source pipeline for benchmarking DNA long read correction algorithms for long reads outputted by t...he Ref-uLR two-way alignments to create three-way alignments using a dynamic programmi...2354 days ago