Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allo...2373 days ago
GIGGLE: a search engine for large-scale integrated genome analysis
GIGGLE is a genomics search engine that identifies and ranks the significance of genomic...ty of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data integration and hypothesis ge...2371 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole genom...tomatically generates alignments from the provided data. Optional feature annotations...pid exploration and manipulation of the visualized data as well as the export of publ...2371 days ago
2361 days ago
PGAP-X: Extension on pan-genome analysis pipeline
PGAP-X is a microbial comparative genomic analysis platform with graphic interface. Seria...genetic variation from pan-genome sight. At the same time, analytical result data from many other programs, inc...2358 days ago
karyoploteR: plot whole genomes with arbitrary data
karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspir...ryoploteR is to offer the user an easy way to plot data along the genome to get broad...2015 days ago
2348 days ago
MUMmer4: A fast and versatile genome alignment system
MUMmer4, a substantially improved version of MUMmer that addresses genome size constraints by changing the 32-bit suffix tree data structure at the core of MUMm...2347 days ago
circosJS: d3 library to build circular graphs
Circos is a javascript library to easily build interactive graphs in a circular layout. It's based on d3.js. It aims to be a javascript version of the Circos software. You should consider using Circos to show: relationships between entities periodical data2337 days ago
2335 days ago