Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data mana...2368 days ago
GIGGLE: a search engine for large-scale integrated genome analysis
GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between quer...ity of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data inte...2366 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole genome alignments. AliTV read...utomatically generates alignments from the provided data. Optional feature annotations...apid exploration and manipulation of the visualized data as w...2366 days ago
2356 days ago
PGAP-X: Extension on pan-genome analysis pipeline
...s have been developed and integrated to analyze and visualize genomics structure variation, gene distribu...c variation from pan-genome sight. At the same time, analytical result data from many other programs, includin...2352 days ago
karyoploteR: plot whole genomes with arbitrary data
karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspir...aryoploteR is to offer the user an easy way to plot data alon...2009 days ago
2343 days ago
MUMmer4: A fast and versatile genome alignment system
MUMmer4, a substantially improved version of MUMmer that addresses genome size constraints by changing the 32-bit suffix tree data structure at the core of MUMmer to a 48-bit suffix array...2342 days ago
circosJS: d3 library to build circular graphs
Circos is a javascript library to easily build interactive graphs in a circular layout. It's based on d3.js. It aims to be a javascript version of the Circos software. You should consider using Circos to show: relationships between entities periodical data2332 days ago
2329 days ago