MIKE: an ultrafast, assembly-, and alignment-free approach for phylogenetic tree construction
MIKE (MinHash-based k-mer algorithm). This algorithm is designed for the swift calculation of the Jaccard coefficient directly from raw sequencing reads and enables the constru...86 days ago
Bactopia: a flexible pipeline for complete analysis of bacterial genomes
... Staphopia, a workflow we (Tim Read and myself) released that is targeted towards Staphylococcus a...as well as your own datasets to further enhance the analysis of your sequencing. Bactopia only uses software...24 days ago