Results for "designed"
Bookmarks
...tion of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events. PRISM and PRISM_CTX were originally designed and written by Michael B...2755 days ago
E-MEM: Efficient computation of Maximal Exact Matches
E-MEM is a C++/OpenMP program designed to efficiently compute MEMs between large genomes. See the README file for instructions on how to use E-MEM. E-MEM source code The source c...2750 days ago
- quickmerge uses a simple concept to improve contiguity of genome assemblies based on long molecule sequences, often with dramatic outcomes. The program uses information...
2746 days ago
- Cgaln (Coarse grained alignment) is a program designed to align a pair of whole genomic sequences of not only bacteria but also entire chromosomes of vertebrates on a nominal desktop c...
2682 days ago
- BioDownloader is a program for downloading and/or updating files from ftp/http servers. The program has unique features that are specifically designed to deal with bioinformatics data...
2678 days ago
- ...ffle genomic intervals from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individual tool is designed to do a relatively simple tas...
2680 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
...ey -----Read The Paperhttp://www.biomedcentral.com/1471-2105/15/180/abstractPBHoney is an implementation of two variant-identification approaches designed to exploit the high mappabili...2676 days ago
- CLgenomics is a standalone desktop software specifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid and responsive ex...
2672 days ago
CLA: Contig-Layout-Authenticator
...so hints at probable misassemblies and contaminations, for the users to cross-check before constructing the consensus draft. The CLA pipeline was designed and trained extensively on va...2610 days ago
NCBI Prokaryotic Genome Annotation Pipeline
NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids). Genome annotation is a multi-level process that includes...2599 days ago
