ERGO 2.0 Bioinformatics suites
...ems biology informatics toolkit centered on comparative genomics to capture, quer...and the most comprehensive genomic database integrated with the largest collectio...bial metabolic and non-metabolic pathways, ERGO™ assigns functions to genes...2605 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...as other functional genome units such as structural RNAs, tRNAs, small RNAs, pse...rect and inverted repeats, insertion sequences, transposons and other mobile elem...) developed in 2005 has been replaced with an upgraded version that is capable of...2605 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
We describe a new method for predicting the ancestral order and orientation of those intervals from thei...ses and computer simulations indicate that our results are reasonably accurate and that they will become h...2603 days ago
ANGES: reconstructing ANcestral GEnomeS maps
...s page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01 (July 10,...2603 days ago
2603 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
...NGS-based assembly projects and it shows its full potential with multi-library Illumina-based projects. Wi...y-product, perhaps even assemblers) by merging them and selecting the generating that is most likely to be...2602 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors intro...polymer errors while remaining sensitive to low coverage areas of sequencing project...r errors. Introduced errors are 20 to 70 times more rare than successfully corrected...2601 days ago
2600 days ago
2599 days ago
npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
npScarf (jsa.np.npscarf) is a program that scaffolds and completes draft genomes assemblies in real-time with Oxford Nanopore sequencing. The pipeline can run on a computing cluster as well as...2598 days ago