Results for "TE"
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...n tool developed at the Institute for Genome Sciences in t...ces circular plots of genome-associated data, like this one: Comm...nces and/or similarities in gene content between related organisms....s, VCF-encoded SNPs, tab-delimited files Outputs publicati...2567 days ago
CoreTracker, a codon reassignment tracker
CoreTracker detects evidences of codon reassignment from the protein repertoire of a set of genomes by successively applying different algorithms. It’s a filtering approach that explore all...2563 days ago
- DESCHRAMBLER is shown to produce highly accurate reconstructions using data simulation and by benchmarking it against other reconstruction tools You can find the detail of reconstructed data at http://bioinfo.konkuk.ac.kr/DESCHRAMBLER/
2563 days ago
DIYA: a bacterial annotation pipeline for any genomics lab
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV http://gmod.org/wiki/Diya2562 days ago
I-PV: Interactive Protein Sequence Visualization
I-PV is a interactive data visualization software designed for inspection of protein sequences and mutation information. It is mainly used for Genetics and Bioinformatics. So what exactly makes it standout? http://i-pv.org/ipv_rec2559 days ago
slacTree: SVG Large Annotated Circular Tree drawing
A simple, extensible, Perl script for producing figures of large p...tree drawing programs, slacTree was originally written in 2009 to fill a need for p...entire trees or highly magnified regions with unlimited resolution Circular and rad...2559 days ago
- ...ntation of the circlize package. Examples in the book are generated under version 0.4.1. If you use circlize in your publications, I would be appreciated if you can cite: Gu, Z. (20...
2557 days ago
GeneProf: analysis of high-throughput sequencing experiment
...-based, graphical software suite that allows users to analyse...e: Easy-to-use web-based interface:Access your data at any time from any computer with a working internet conn...ombined freely into sophisticated workflows (cp. Concept...a from GeneProf may be used externally (cp. Section 'Web...2557 days ago
Omega2: metagenome assembly pipeline
...and trimming short branches. Unitigs were generated based on minimum cost flow a...and then merged to contigs and scaffolds using mate-pair information. In comparis...overlap-layout-consensus assemblers. This indicates Omega can more efficiently a...2552 days ago
- https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MIT7_91JS14_Lecture6.pdf
2552 days ago
