Results for "plant genome"
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CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between...TF, VCF. CrossMap is designed to liftover genome coordinates between assemblie...rogram for aligning sequences to reference genome. We do not recommend using C...3063 days ago
- Spines Spines is a collection of...developed and used by the Vertebrate Genome Biology Group at the Broad In...lelized program for high-sensitivity, genome-wide synteny; Papaya, an all-...w.broadinstitute.org/science/programs/genome-biology/spines
3063 days ago
- flo - same species annotations lift over pipeline Lift o...is the process of transferring annotations from one genome assembly to another. Usually lift over is done because there is a new, improved genome assembly for the species and...
3061 days ago
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses differ...or NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/tools/remap API http://www.n...
3060 days ago
- Although centromeres are essential for life...search, centromere locations in yeast genomes are difficult to infer, and...verse applications, including de novo genome assembly, deconvolution of me...of all centromeres in a single yeast genome by exploiting the centromeres...
3060 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for...running the binary with no arguments. The UCSC Genome Browser and Blat software are...r information about commercial licensing of the Genome Browser software, see http://...3054 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutor...tabase (no relational database required!) Later we will show how to set up a genome size database using the berke...
3052 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources ar...ive and reproducible analysis of chordate genome data. Ensembl computes pairwise and multiple whole-genome alignments from which large-s...ecies by other projects including Ensembl Genomes and Gramene and much of the...3043 days ago
Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying curiosity , but a...3036 days ago
