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gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html2962 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2959 days ago
- ...ut selected. Then select one or more output types and add your identifiers in the ID list box. Set the remove duplicate values to 'No' if you do not want duplicates to be removed. C...
2949 days ago
- This histone database can be used to explore the diversity of histone proteins and their sequence variants in many organisms. The resource was established to better understand how s...
2948 days ago
- ...on its own as it requires contig data to be supplied in a format that involves considerable preprocessing (see below for a description). The easiest way to use Blobsplorer is as par...
2937 days ago
- ...tool for correcting sequencing errors in long reads such those produced by Pacific Biosciences sequencing machines. Publication: L. Salmela, R. Walve, E. Rivals, and E. Ukkonen...
2221 days ago
CovCal: Coverage / Read Count Calculator
...: set the read length/configuration and genome size, then select what you want to calculate. Written by Stephen Turner, based on the Lander-Waterman formula, inspired by a...2221 days ago
- ...uang Yu <guangchuangyu at gmail.com> with contributions from Li-Gen Wang and Giovanni Dall'Olio.Main....com>Citation (from within R, enter citation("clusterProfiler")):Yu G, Wang L, Han Y and He Q (2012). &...
2935 days ago
- ...cting all newly acquired genes in a particular strain. Availability: The method is publicly available athttp://research.haifa.ac.il/~ssagi/software/nearHGT.zip
2929 days ago
- ...tSAMtools is a popular open-source tool used in next-generation sequence analysis. This primer provides an introduction to SAMtools, and is geared towards those new to next-generati...
2928 days ago
