2600 days ago
2600 days ago
2596 days ago
TARDIS: Toolkit for automated and rapid discovery of structural variants
...tural variants Requirements zlib (http://www.zlib.net)mrfast (https://github.com/BilkentCompGen/mrfast)hts...ded as submodule; http://htslib.org/)Fetching tardis git clone https://github.com/BilkentCompGen/tardis.git...2578 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...a GTF file. ...and much more.GraphMap is also used as an overlapper in a new de novo genome assembly project called Ra (https://github.com/mariokostelac/ra-integrat...2580 days ago
Genetic-mapper: SVG Genetic Map Drawer
...lt;tab>POS<tab>LOD 13519 12 0 0.250840894 2718 12 1.0 0.250840893 11040 12 1.6 0.252843341 ... https://github.com/pseudogene/genetic-mapper2569 days ago
2562 days ago
CoreTracker, a codon reassignment tracker
...only the most promising one. Detailled information about the package, installation and tutorials are available here ==> http://udem-lbit.github.io/CoreTracker/...2558 days ago
Unicycler: Hybrid assembly pipeline for bacterial genomes
Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembl...2424 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
...tware is implemented in Python 3 and runs in both Python 2.7 and 3.4– on Macintosh and Linux systems. It is freely available at https://github.com/nigyta/dfast_core/ u...2420 days ago