Barrnap: Bacterial ribosomal RNA predictor
...NA:DNA style. NHMMER binaries for 64-bit Linux and Mac OS X are included and will be auto-detected. Multithreading is supported and one can expect roughly linear speed-ups with more...2578 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
...bp. Analysis of the predicted evolutionary breakpoints in the human lineage confirms certain published observations but disagrees with others. Although only a few mammalian genomes...2572 days ago
ANGES: reconstructing ANcestral GEnomeS maps
...ral genome maps from homologous markers in extant related genomes. Download Program, version 1.01 (July 10, 2012, documentation updated in August 2014) Examples with resul...2572 days ago
2569 days ago
dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DO...2561 days ago
Genome Annotation Transfer Utility (GATU)
...and BBB. Afterwards, they can either be accepted for/rejected from annotation. GATU can handle multiple-exon genes as well as mature peptides. Although it was designed for use with...2561 days ago
2556 days ago
NovelSeq: Novel Sequence Insertion Detection
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/203857262550 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...semiglobal bit-vector and Gotoh, anchored). Overlapping of reads for de novo assembly. Transcriptome mapping through internal construction of a t...2552 days ago
2540 days ago