Results for "short reads mapping"
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PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and...er with a highly optimized implementation, it can merge millions of paired end reads w...2746 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any number of...2746 days ago
- quickmerge uses a simple concept to improve contiguity of genome assemblies based...information from assemblies made with illumina short reads and PacBio long reads to improve contiguities of an...one. This is counterintuitive because illumina short r...
2746 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads t...
2746 days ago
- pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long reads (...
2746 days ago
- If genomes were completely random sequences in a statistical sense, 'overlap-consensus-layout' method would have been enough to assemble large genomes from Sanger reads....
2745 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled bases. The assembler reads two files in FASTQ format wit...ximise the probability of the forward and reverse reads h...
2711 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleot...2642 days ago
- The hive plot is a rational visualization method for drawing networks. Nod...are mapped to and positioned on radially distributed linear axes — this mapping is based on network structura...
2687 days ago
- BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circul...or even raw, unassembled sequence data. BRIG also accepts SAM-formatted read-mapping files enabling genomic region...
2687 days ago
