Results for "AP"
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...d visualization platform for ‘omics data. Please find the methods paper here: https://peerj.com/art...to its development. Here is the acknowledgements section of our methods paper An analysis and visualizat...2938 days ago
- DarkHorse is a bioinformatic method for rapid, automated identification and ranking of phylogenetically atypical proteins on a genome-wide basis. It works by selecting potentia...
2932 days ago
- ...izontally acquired genes. We then compared the method to existing HGT detection tools using a larger strain data set. When combined with additional approaches our new algorithm pro...
2932 days ago
- ...and writes the true read coordinates as well as the number of polymorphisms and sequencing errors in read names. One can evaluate the accuracy of a mapper or a SNP caller with wgsim...
2931 days ago
- ...n levels. Genomic technologies for mapping interactions between DNA...and HiC, can generate genome-wide maps of interactions between regu...sentation of chromatin interaction maps enables effective data visua...n Java and JavaScript, utilizing an Apache Tomcat web server and MyS...
2927 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...r reads at a rate of over 4.1 million reads per minute, 909 times faster than Megablast and 11 times faster than the abundance estimation program MetaPhlAn. Kraken is available at h...2927 days ago
- The greengenes web application provides access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for browsing, blasting, probing, and downloading. The dat...
2925 days ago
- In machine learning, computers apply statistical learning techniques to automatically identify patterns in data. These techniques can be used to make highly accurate predi...
2923 days ago
Fancy Oneliner for Bioinformatics !!
...d folder structures as we have. We are sharing these codes with the intention that if they are useful and help you in your analyses, then we will be appropriately credited as consid...2917 days ago
- ...an be used together with virtually any genome assembler and any NGS read mapper that supports SAM format....General Public License (GPL). See the user manual or the paper for more information a...
2911 days ago
